TOPCONS-single Thursday, November 21 2024
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Pre-run predictions for whole genomes
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TOPCONS-single predictions of whole genomes
Ensembl (https://www.ensembl.org/)

Sequences

Human non-redundant set
(one protein per gene)		Homo_sapiens.GRCh37.60.pep.all_filtered.fa

TOPCONS-single predicted topologies

Human non-redundant set
(one protein per gene)		Homo_sapiens.GRCh37.60.pep.all_filtered.pred.txt



Full genomes from IPI (https://www.ebi.ac.uk/IPI)

Sequences

Humanipi.human.fasta
Arabidopsisipi.arath.fasta
Cowipi.bovine.fasta
Chickenipi.chick.fasta
Zebrafishipi.danre.fasta
Mouseipi.mouse.fasta
Ratipi.rat.fasta

TOPCONS-single predicted topologies

Humanipi.human.topcons_single_pred.txt
Arabidopsisipi.arath.topcons_single_pred.txt
Cowipi.bovine.topcons_single_pred.txt
Chickenipi.chick.topcons_single_pred.txt
Zebrafishipi.danre.topcons_single_pred.txt
Mouseipi.mouse.topcons_single_pred.txt
Ratipi.rat.topcons_single_pred.txt
 
 
© 2010 Stockholm University, Stockholm Bioinformatics Centre, Center for Biomembrane Research